Task 38644796

Name tnks2_A02_A20_r0_1-QUICO_ATM_OpenFF23_NAGL_tnks2-1-6-RND5290_0
Workunit 31590106
Created 9 May 2026, 16:26:27 UTC
Sent 9 May 2026, 16:26:34 UTC
Report deadline 14 May 2026, 16:26:34 UTC
Received 11 May 2026, 4:57:39 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 400693
Run time 9 hours 41 min 10 sec
CPU time 9 hours 0 min 53 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 4,172.22 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 458.34 MB
Peak swap size 3.46 GB
Peak disk usage 3.89 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
21:18:24 (7712): wrapper (7.9.26016): starting
21:18:24 (7712): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A02_A20_0.pdb
QB_A02_A20_0.xml
QB_A02_A20.inpcrd
QB_A02_A20_input.yaml
QB_A02_A20.pdb
QB_A02_A20.prmtop
QB_A02_A20_sys.xml
run.bat
run.sh
21:18:27 (7712): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:18:27 (7712): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\9\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\9\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
06:56:17 (7712): C:/Windows/system32/cmd.exe exited; CPU time 32453.734375
06:56:17 (7712): called boinc_finish(0)
0 bytes in 0 Free Blocks.
546 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 383850165 bytes.
Dumping objects ->
{3835132} normal block at 0x0000026E83970DB0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835121} normal block at 0x0000026E83970B10, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835110} normal block at 0x0000026E839712F0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835099} normal block at 0x0000026E839708E0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835088} normal block at 0x0000026E83970D40, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835057} normal block at 0x0000026E83A76110, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835046} normal block at 0x0000026E81F3CAF0, 145 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835043} normal block at 0x0000026E81EE7500, 8 bytes long.
 Data: <  &#235; n   > 00 00 EB 81 6E 02 00 00 
{3834495} normal block at 0x0000026E81F3C7B0, 145 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833955} normal block at 0x0000026E81EE6B50, 8 bytes long.
 Data: <P"&#173;&#131;n   > 50 22 AD 83 6E 02 00 00 
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x0000026E81EF1890, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000026E81EED190, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x0000026E81EF36E0, 16 bytes long.
 Data: <&#200;>&#239; n           > C8 3E EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000026E81EF2DD0, 16 bytes long.
 Data: <&#160;>&#239; n           > A0 3E EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000026E81EEBC70, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x0000026E81EF33C0, 16 bytes long.
 Data: <x>&#239; n           > 78 3E EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000026E81EF3370, 16 bytes long.
 Data: <P>&#239; n           > 50 3E EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000026E81EF29C0, 16 bytes long.
 Data: <(>&#239; n           > 28 3E EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000026E81EF2D80, 16 bytes long.
 Data: < >&#239; n           > 00 3E EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000026E81EED780, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x0000026E81EF2970, 16 bytes long.
 Data: <8&#191;&#237; n           > 38 BF ED 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000026E81EEBC10, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x0000026E81EF2B00, 16 bytes long.
 Data: < &#191;&#237; n           > 10 BF ED 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000026E81EF32D0, 16 bytes long.
 Data: <&#232;&#190;&#237; n           > E8 BE ED 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000026E81EF2CE0, 16 bytes long.
 Data: <&#192;&#190;&#237; n           > C0 BE ED 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000026E81EF28D0, 16 bytes long.
 Data: < &#190;&#237; n           > 98 BE ED 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000026E81EF3640, 16 bytes long.
 Data: <p&#190;&#237; n           > 70 BE ED 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000026E81EF3230, 16 bytes long.
 Data: <H&#190;&#237; n           > 48 BE ED 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000026E81EEC4B0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{275} normal block at 0x0000026E81EF2E20, 16 bytes long.
 Data: < &#190;&#237; n           > 20 BE ED 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000026E81EDBE20, 320 bytes long.
 Data: < .&#239; n   &#176;&#196;&#238; n   > 20 2E EF 81 6E 02 00 00 B0 C4 EE 81 6E 02 00 00 
{273} normal block at 0x0000026E81EF35F0, 16 bytes long.
 Data: <&#224;=&#239; n           > E0 3D EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000026E81EF35A0, 16 bytes long.
 Data: <&#184;=&#239; n           > B8 3D EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000026E81EEC0F0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{270} normal block at 0x0000026E81EF31E0, 16 bytes long.
 Data: < =&#239; n           > 90 3D EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000026E81EEC510, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{268} normal block at 0x0000026E81EF3730, 16 bytes long.
 Data: <&#216;<&#239; n           > D8 3C EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000026E81EF30A0, 16 bytes long.
 Data: <&#176;<&#239; n           > B0 3C EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000026E81EF3690, 16 bytes long.
 Data: < <&#239; n           > 88 3C EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000026E81EF2830, 16 bytes long.
 Data: <`<&#239; n           > 60 3C EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000026E81EF3140, 16 bytes long.
 Data: <8<&#239; n           > 38 3C EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000026E81EF3280, 16 bytes long.
 Data: < <&#239; n           > 10 3C EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000026E81EF2EC0, 16 bytes long.
 Data: <@&#217;&#238; n           > 40 D9 EE 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000026E81EED940, 40 bytes long.
 Data: <&#192;.&#239; n    a&#167;&#131;n   > C0 2E EF 81 6E 02 00 00 10 61 A7 83 6E 02 00 00 
{259} normal block at 0x0000026E81EF2A10, 16 bytes long.
 Data: <&#240;;&#239; n           > F0 3B EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000026E81EF2920, 16 bytes long.
 Data: <&#200;;&#239; n           > C8 3B EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000026E81EEC1B0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{256} normal block at 0x0000026E81EF2C90, 16 bytes long.
 Data: <&#160;;&#239; n           > A0 3B EF 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000026E81EF3BA0, 992 bytes long.
 Data: < ,&#239; n   &#176;&#193;&#238; n   > 90 2C EF 81 6E 02 00 00 B0 C1 EE 81 6E 02 00 00 
{91} normal block at 0x0000026E81EEBD90, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{90} normal block at 0x0000026E81EE6F10, 16 bytes long.
 Data: <0&#214;&#238; n           > 30 D6 EE 81 6E 02 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x0000026E81EED630, 40 bytes long.
 Data: < o&#238; n    &#189;&#238; n   > 10 6F EE 81 6E 02 00 00 90 BD EE 81 6E 02 00 00 
{68} normal block at 0x0000026E81EE6C90, 16 bytes long.
 Data: < &#234;&#252;&#135;&#247;           > 80 EA FC 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000026E81EE7190, 16 bytes long.
 Data: <@&#233;&#252;&#135;&#247;           > 40 E9 FC 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000026E81EE6E70, 16 bytes long.
 Data: <&#248;W&#249;&#135;&#247;           > F8 57 F9 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000026E81EE6AB0, 16 bytes long.
 Data: <&#216;W&#249;&#135;&#247;           > D8 57 F9 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000026E81EE6DD0, 16 bytes long.
 Data: <P &#249;&#135;&#247;           > 50 04 F9 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000026E81EE6A60, 16 bytes long.
 Data: <0 &#249;&#135;&#247;           > 30 04 F9 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000026E81EE6E20, 16 bytes long.
 Data: <&#224; &#249;&#135;&#247;           > E0 02 F9 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000026E81EE7000, 16 bytes long.
 Data: <  &#249;&#135;&#247;           > 10 04 F9 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000026E81EE6EC0, 16 bytes long.
 Data: <p &#249;&#135;&#247;           > 70 04 F9 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000026E81EE6970, 16 bytes long.
 Data: < &#192;&#247;&#135;&#247;           > 18 C0 F7 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra