Task 38640627

Name p38_3_A04_A01_r0_5-QUICO_ATM_OpenFF_NAGL_p38_3-3-6-RND2597_0
Workunit 31587954
Created 1 May 2026, 18:05:49 UTC
Sent 1 May 2026, 18:05:56 UTC
Report deadline 6 May 2026, 18:05:56 UTC
Received 14 May 2026, 12:11:49 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 630739
Run time 14 hours 52 min 29 sec
CPU time 14 hours 43 min 39 sec
Validate state Task was reported too late to validate
Credit 0.00
Device peak FLOPS 15,305.35 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 651.53 MB
Peak swap size 11.37 GB
Peak disk usage 3.08 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
20:48:34 (62168): wrapper (7.9.26016): starting
20:48:34 (62168): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A04_A01_0.pdb
QB_A04_A01_0.xml
QB_A04_A01.inpcrd
QB_A04_A01_input.yaml
QB_A04_A01.pdb
QB_A04_A01.prmtop
QB_A04_A01_sys.xml
run.bat
run.sh
20:48:36 (62168): Library/usr/bin/tar.exe exited; CPU time 0.000000
20:48:36 (62168): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
11:39:00 (62168): C:/Windows/system32/cmd.exe exited; CPU time 53019.031250
11:39:00 (62168): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
2288 bytes in 2 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 1254703215 bytes.
Dumping objects ->
{3835284} normal block at 0x000002BAAC37D8F0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835273} normal block at 0x000002BAAA5F56A0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835262} normal block at 0x000002BAAA5F5630, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835251} normal block at 0x000002BAAA5F55C0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835240} normal block at 0x000002BAAA5F5550, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835209} normal block at 0x000002BAAC3C9E80, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835198} normal block at 0x000002BAAC3DE310, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835195} normal block at 0x000002BAAA5ED7A0, 8 bytes long.
 Data: <   &#172;&#186;   > 00 00 0C AC BA 02 00 00 
{3834571} normal block at 0x000002BAAC3DECB0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x000002BAAA5ED9D0, 8 bytes long.
 Data: <P&#218;]&#170;&#186;   > 50 DA 5D AA BA 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x000002BAAA5E0C00, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000002BAAA5E1E20, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x000002BAAA5F58A0, 16 bytes long.
 Data: < j_&#170;&#186;           > 98 6A 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000002BAAA5F5940, 16 bytes long.
 Data: <pj_&#170;&#186;           > 70 6A 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002BAAA5F10B0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x000002BAAA5F6070, 16 bytes long.
 Data: <Hj_&#170;&#186;           > 48 6A 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002BAAA5F5B70, 16 bytes long.
 Data: < j_&#170;&#186;           > 20 6A 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002BAAA5F5A30, 16 bytes long.
 Data: <&#248;i_&#170;&#186;           > F8 69 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002BAAA5F5850, 16 bytes long.
 Data: <&#208;i_&#170;&#186;           > D0 69 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002BAAA5F5080, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x000002BAAA5F6110, 16 bytes long.
 Data: <&#200;&#252;]&#170;&#186;           > C8 FC 5D AA BA 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002BAAA5F1830, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x000002BAAA5F5800, 16 bytes long.
 Data: <&#160;&#252;]&#170;&#186;           > A0 FC 5D AA BA 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002BAAA5F6390, 16 bytes long.
 Data: <x&#252;]&#170;&#186;           > 78 FC 5D AA BA 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002BAAA5F5B20, 16 bytes long.
 Data: <P&#252;]&#170;&#186;           > 50 FC 5D AA BA 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002BAAA5F58F0, 16 bytes long.
 Data: <(&#252;]&#170;&#186;           > 28 FC 5D AA BA 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002BAAA5F5DA0, 16 bytes long.
 Data: < &#252;]&#170;&#186;           > 00 FC 5D AA BA 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002BAAA5F57B0, 16 bytes long.
 Data: <&#216;&#251;]&#170;&#186;           > D8 FB 5D AA BA 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002BAAA5F1470, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x000002BAAA5F6700, 16 bytes long.
 Data: <&#176;&#251;]&#170;&#186;           > B0 FB 5D AA BA 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002BAAA5DFBB0, 320 bytes long.
 Data: < g_&#170;&#186;   p _&#170;&#186;   > 00 67 5F AA BA 02 00 00 70 14 5F AA BA 02 00 00 
{277} normal block at 0x000002BAAA5F5E40, 16 bytes long.
 Data: <&#176;i_&#170;&#186;           > B0 69 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002BAAA5F6610, 16 bytes long.
 Data: < i_&#170;&#186;           > 88 69 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002BAAA5F1350, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x000002BAAA5F5AD0, 16 bytes long.
 Data: <`i_&#170;&#186;           > 60 69 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002BAAA5F1050, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x000002BAAA5F5C60, 16 bytes long.
 Data: <&#168;h_&#170;&#186;           > A8 68 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002BAAA5F5C10, 16 bytes long.
 Data: < h_&#170;&#186;           > 80 68 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002BAAA5F6660, 16 bytes long.
 Data: <Xh_&#170;&#186;           > 58 68 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002BAAA5F6020, 16 bytes long.
 Data: <0h_&#170;&#186;           > 30 68 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002BAAA5F6520, 16 bytes long.
 Data: < h_&#170;&#186;           > 08 68 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002BAAA5F63E0, 16 bytes long.
 Data: <&#224;g_&#170;&#186;           > E0 67 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002BAAA5F6340, 16 bytes long.
 Data: < P_&#170;&#186;           > 10 50 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002BAAA5F5010, 40 bytes long.
 Data: <@c_&#170;&#186;    &#158;<&#172;&#186;   > 40 63 5F AA BA 02 00 00 80 9E 3C AC BA 02 00 00 
{263} normal block at 0x000002BAAA5F5D50, 16 bytes long.
 Data: <&#192;g_&#170;&#186;           > C0 67 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002BAAA5F6570, 16 bytes long.
 Data: < g_&#170;&#186;           > 98 67 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002BAAA5F0F90, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x000002BAAA5F5A80, 16 bytes long.
 Data: <pg_&#170;&#186;           > 70 67 5F AA BA 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002BAAA5F6770, 992 bytes long.
 Data: < Z_&#170;&#186;     _&#170;&#186;   > 80 5A 5F AA BA 02 00 00 90 0F 5F AA BA 02 00 00 
{95} normal block at 0x000002BAAA5F17D0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x000002BAAA5ED200, 16 bytes long.
 Data: < &#214;]&#170;&#186;           > 20 D6 5D AA BA 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x000002BAAA5DD620, 40 bytes long.
 Data: < &#210;^&#170;&#186;   &#208; _&#170;&#186;   > 00 D2 5E AA BA 02 00 00 D0 17 5F AA BA 02 00 00 
{72} normal block at 0x000002BAAA5EDCA0, 16 bytes long.
 Data: < &#234;H$&#247;           > 80 EA 48 24 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000002BAAA5EDB60, 16 bytes long.
 Data: <@&#233;H$&#247;           > 40 E9 48 24 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002BAAA5EE060, 16 bytes long.
 Data: <&#248;WE$&#247;           > F8 57 45 24 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002BAAA5ED930, 16 bytes long.
 Data: <&#216;WE$&#247;           > D8 57 45 24 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002BAAA5ED340, 16 bytes long.
 Data: <P E$&#247;           > 50 04 45 24 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002BAAA5ED570, 16 bytes long.
 Data: <0 E$&#247;           > 30 04 45 24 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002BAAA5EDA20, 16 bytes long.
 Data: <&#224; E$&#247;           > E0 02 45 24 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002BAAA5ED700, 16 bytes long.
 Data: <  E$&#247;           > 10 04 45 24 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002BAAA5EE0B0, 16 bytes long.
 Data: <p E$&#247;           > 70 04 45 24 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002BAAA5EDAC0, 16 bytes long.
 Data: < &#192;C$&#247;           > 18 C0 43 24 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra