Task 38637487

Name p38_3_A27_A26_r0_5-QUICO_ATM_OpenFF_NAGL_p38_3-1-6-RND9726_0
Workunit 31585486
Created 29 Apr 2026, 16:50:43 UTC
Sent 29 Apr 2026, 16:50:55 UTC
Report deadline 4 May 2026, 16:50:55 UTC
Received 29 Apr 2026, 23:22:47 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652297
Run time 6 hours 31 min 52 sec
CPU time 6 hours 33 min 38 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 16,498.09 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 666.99 MB
Peak swap size 6.92 GB
Peak disk usage 3.09 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
00:52:42 (62560): wrapper (7.9.26016): starting
00:52:42 (62560): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A27_A26_0.pdb
QB_A27_A26_0.xml
QB_A27_A26.inpcrd
QB_A27_A26_input.yaml
QB_A27_A26.pdb
QB_A27_A26.prmtop
QB_A27_A26_sys.xml
run.bat
run.sh
00:52:43 (62560): Library/usr/bin/tar.exe exited; CPU time 0.015625
00:52:43 (62560): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
07:22:05 (62560): C:/Windows/system32/cmd.exe exited; CPU time 23618.531250
07:22:05 (62560): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 320221083 bytes.
Dumping objects ->
{3835329} normal block at 0x0000026B96BDD960, 48 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835318} normal block at 0x0000026B96BDD490, 48 bytes long.
 Data: <HOME=D:\ProgramD> 48 4F 4D 45 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835307} normal block at 0x0000026B96BDD420, 48 bytes long.
 Data: <TMP=D:\ProgramDa> 54 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835296} normal block at 0x0000026B96BDDC70, 48 bytes long.
 Data: <TEMP=D:\ProgramD> 54 45 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835285} normal block at 0x0000026B96BDDE30, 48 bytes long.
 Data: <TMPDIR=D:\Progra> 54 4D 50 44 49 52 3D 44 3A 5C 50 72 6F 67 72 61 
{3835254} normal block at 0x0000026B9880D550, 64 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835243} normal block at 0x0000026B98822510, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835240} normal block at 0x0000026B96BAE2A0, 8 bytes long.
 Data: <  &#255;&#150;k   > 00 00 FF 96 6B 02 00 00 
{3834589} normal block at 0x0000026B98822F60, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833965} normal block at 0x0000026B96BAE250, 8 bytes long.
 Data: <&#224;&#145;&#187;&#150;k   > E0 91 BB 96 6B 02 00 00 
..\zip\boinc_zip.cpp(122) : {314} normal block at 0x0000026B96BA6B60, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000026B96BA58A0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{298} normal block at 0x0000026B96BB9EB0, 16 bytes long.
 Data: <(&#176;&#187;&#150;k           > 28 B0 BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000026B96BBA540, 16 bytes long.
 Data: < &#176;&#187;&#150;k           > 00 B0 BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000026B96BB4110, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{295} normal block at 0x0000026B96BB9E60, 16 bytes long.
 Data: <&#216;&#175;&#187;&#150;k           > D8 AF BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000026B96BB9A50, 16 bytes long.
 Data: <&#176;&#175;&#187;&#150;k           > B0 AF BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000026B96BB9A00, 16 bytes long.
 Data: < &#175;&#187;&#150;k           > 88 AF BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000026B96BBA4A0, 16 bytes long.
 Data: <`&#175;&#187;&#150;k           > 60 AF BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000026B96BB57A0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{290} normal block at 0x0000026B96BBA2C0, 16 bytes long.
 Data: <xb&#186;&#150;k           > 78 62 BA 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000026B96BB45F0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{288} normal block at 0x0000026B96BB9D20, 16 bytes long.
 Data: <Pb&#186;&#150;k           > 50 62 BA 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000026B96BB9960, 16 bytes long.
 Data: <(b&#186;&#150;k           > 28 62 BA 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000026B96BB9910, 16 bytes long.
 Data: < b&#186;&#150;k           > 00 62 BA 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000026B96BB9E10, 16 bytes long.
 Data: <&#216;a&#186;&#150;k           > D8 61 BA 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000026B96BBA090, 16 bytes long.
 Data: <&#176;a&#186;&#150;k           > B0 61 BA 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000026B96BB9CD0, 16 bytes long.
 Data: < a&#186;&#150;k           > 88 61 BA 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000026B96BB44D0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{280} normal block at 0x0000026B96BBA720, 16 bytes long.
 Data: <`a&#186;&#150;k           > 60 61 BA 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000026B96BA6160, 320 bytes long.
 Data: < &#167;&#187;&#150;k   &#208;D&#187;&#150;k   > 20 A7 BB 96 6B 02 00 00 D0 44 BB 96 6B 02 00 00 
{278} normal block at 0x0000026B96BBA270, 16 bytes long.
 Data: <@&#175;&#187;&#150;k           > 40 AF BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000026B96BBA5E0, 16 bytes long.
 Data: < &#175;&#187;&#150;k           > 18 AF BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000026B96BB3CF0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{275} normal block at 0x0000026B96BB9DC0, 16 bytes long.
 Data: <&#240;&#174;&#187;&#150;k           > F0 AE BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000026B96BB4230, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{273} normal block at 0x0000026B96BBA130, 16 bytes long.
 Data: <8&#174;&#187;&#150;k           > 38 AE BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000026B96BBA180, 16 bytes long.
 Data: < &#174;&#187;&#150;k           > 10 AE BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000026B96BBA040, 16 bytes long.
 Data: <&#232;&#173;&#187;&#150;k           > E8 AD BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000026B96BB9C80, 16 bytes long.
 Data: <&#192;&#173;&#187;&#150;k           > C0 AD BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000026B96BB9F50, 16 bytes long.
 Data: < &#173;&#187;&#150;k           > 98 AD BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000026B96BBA450, 16 bytes long.
 Data: <p&#173;&#187;&#150;k           > 70 AD BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000026B96BB9BE0, 16 bytes long.
 Data: <&#192;V&#187;&#150;k           > C0 56 BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000026B96BB56C0, 40 bytes long.
 Data: <&#224;&#155;&#187;&#150;k   P&#213;  k   > E0 9B BB 96 6B 02 00 00 50 D5 80 98 6B 02 00 00 
{264} normal block at 0x0000026B96BB98C0, 16 bytes long.
 Data: <P&#173;&#187;&#150;k           > 50 AD BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000026B96BBA400, 16 bytes long.
 Data: <(&#173;&#187;&#150;k           > 28 AD BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000026B96BB49B0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{261} normal block at 0x0000026B96BBA3B0, 16 bytes long.
 Data: < &#173;&#187;&#150;k           > 00 AD BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000026B96BBAD00, 992 bytes long.
 Data: <&#176;&#163;&#187;&#150;k   &#176;I&#187;&#150;k   > B0 A3 BB 96 6B 02 00 00 B0 49 BB 96 6B 02 00 00 
{96} normal block at 0x0000026B96BB4950, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{95} normal block at 0x0000026B96BAE7A0, 16 bytes long.
 Data: < [&#187;&#150;k           > 90 5B BB 96 6B 02 00 00 00 00 00 00 00 00 00 00 
{94} normal block at 0x0000026B96BB5B90, 40 bytes long.
 Data: <&#160;&#231;&#186;&#150;k   PI&#187;&#150;k   > A0 E7 BA 96 6B 02 00 00 50 49 BB 96 6B 02 00 00 
{73} normal block at 0x0000026B96BADF30, 16 bytes long.
 Data: < &#234;&#244;Z&#247;           > 80 EA F4 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000026B96BAE200, 16 bytes long.
 Data: <@&#233;&#244;Z&#247;           > 40 E9 F4 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000026B96BADC10, 16 bytes long.
 Data: <&#248;W&#241;Z&#247;           > F8 57 F1 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000026B96BAE2F0, 16 bytes long.
 Data: <&#216;W&#241;Z&#247;           > D8 57 F1 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000026B96BAE020, 16 bytes long.
 Data: <P &#241;Z&#247;           > 50 04 F1 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000026B96BAE6B0, 16 bytes long.
 Data: <0 &#241;Z&#247;           > 30 04 F1 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000026B96BADFD0, 16 bytes long.
 Data: <&#224; &#241;Z&#247;           > E0 02 F1 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000026B96BAE9D0, 16 bytes long.
 Data: <  &#241;Z&#247;           > 10 04 F1 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000026B96BAE610, 16 bytes long.
 Data: <p &#241;Z&#247;           > 70 04 F1 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000026B96BAE930, 16 bytes long.
 Data: < &#192;&#239;Z&#247;           > 18 C0 EF 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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