Task 38636761

Name p38_3_A11_A33_r0_3-QUICO_ATM_OpenFF_NAGL_p38_3-0-6-RND7216_1
Workunit 31583496
Created 29 Apr 2026, 9:56:09 UTC
Sent 29 Apr 2026, 9:56:12 UTC
Report deadline 4 May 2026, 9:56:12 UTC
Received 30 Apr 2026, 0:13:48 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 620393
Run time 4 hours 9 min 37 sec
CPU time 4 hours 1 min 12 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 41,942.09 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 697.92 MB
Peak swap size 8.41 GB
Peak disk usage 3.01 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
22:04:46 (35212): wrapper (7.9.26016): starting
22:04:46 (35212): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A11_A33_0.pdb
QB_A11_A33_0.xml
QB_A11_A33.inpcrd
QB_A11_A33_input.yaml
QB_A11_A33.pdb
QB_A11_A33.prmtop
QB_A11_A33_sys.xml
run.bat
run.sh
22:04:47 (35212): Library/usr/bin/tar.exe exited; CPU time 0.000000
22:04:47 (35212): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\8\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\8\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
02:13:02 (35212): C:/Windows/system32/cmd.exe exited; CPU time 14472.046875
02:13:02 (35212): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 285128085 bytes.
Dumping objects ->
{3835208} normal block at 0x000001FCAA7B6480, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835197} normal block at 0x000001FCAA7B6410, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835186} normal block at 0x000001FCAA7B6640, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835175} normal block at 0x000001FCAA7B63A0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835164} normal block at 0x000001FCAA7B6330, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835133} normal block at 0x000001FCAC645FE0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835120} normal block at 0x000001FCAA7AE2A0, 8 bytes long.
 Data: <  &#214;&#170;&#252;   > 00 00 D6 AA FC 01 00 00 
{3833961} normal block at 0x000001FCAA7AD940, 8 bytes long.
 Data: <&#160;Fj&#172;&#252;   > A0 46 6A AC FC 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000001FCAA7A1690, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001FCAA7A27A0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x000001FCAA7B5D40, 16 bytes long.
 Data: <8m{&#170;&#252;           > 38 6D 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001FCAA7B5CF0, 16 bytes long.
 Data: < m{&#170;&#252;           > 10 6D 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001FCAA7B0060, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x000001FCAA7B5A20, 16 bytes long.
 Data: <&#232;l{&#170;&#252;           > E8 6C 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001FCAA7B59D0, 16 bytes long.
 Data: <&#192;l{&#170;&#252;           > C0 6C 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001FCAA7B5020, 16 bytes long.
 Data: < l{&#170;&#252;           > 98 6C 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001FCAA7B5CA0, 16 bytes long.
 Data: <pl{&#170;&#252;           > 70 6C 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001FCAA7B66B0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x000001FCAA7B57F0, 16 bytes long.
 Data: <&#216; z&#170;&#252;           > D8 08 7A AA FC 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001FCAA7AFB20, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x000001FCAA7B4E90, 16 bytes long.
 Data: <&#176; z&#170;&#252;           > B0 08 7A AA FC 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001FCAA7B5980, 16 bytes long.
 Data: <  z&#170;&#252;           > 88 08 7A AA FC 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001FCAA7B5C50, 16 bytes long.
 Data: <` z&#170;&#252;           > 60 08 7A AA FC 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001FCAA7B5A70, 16 bytes long.
 Data: <8 z&#170;&#252;           > 38 08 7A AA FC 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001FCAA7B57A0, 16 bytes long.
 Data: <  z&#170;&#252;           > 10 08 7A AA FC 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001FCAA7B4E40, 16 bytes long.
 Data: <&#232; z&#170;&#252;           > E8 07 7A AA FC 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001FCAA7B0240, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x000001FCAA7B5750, 16 bytes long.
 Data: <&#192; z&#170;&#252;           > C0 07 7A AA FC 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001FCAA7A07C0, 320 bytes long.
 Data: <PW{&#170;&#252;   @ {&#170;&#252;   > 50 57 7B AA FC 01 00 00 40 02 7B AA FC 01 00 00 
{276} normal block at 0x000001FCAA7B56B0, 16 bytes long.
 Data: <Pl{&#170;&#252;           > 50 6C 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001FCAA7B52F0, 16 bytes long.
 Data: <(l{&#170;&#252;           > 28 6C 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001FCAA7B03C0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x000001FCAA7B5660, 16 bytes long.
 Data: < l{&#170;&#252;           > 00 6C 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001FCAA7AFAC0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x000001FCAA7B58E0, 16 bytes long.
 Data: <Hk{&#170;&#252;           > 48 6B 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001FCAA7B5C00, 16 bytes long.
 Data: < k{&#170;&#252;           > 20 6B 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001FCAA7B5570, 16 bytes long.
 Data: <&#248;j{&#170;&#252;           > F8 6A 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001FCAA7B5070, 16 bytes long.
 Data: <&#208;j{&#170;&#252;           > D0 6A 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001FCAA7B52A0, 16 bytes long.
 Data: <&#168;j{&#170;&#252;           > A8 6A 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001FCAA7B54D0, 16 bytes long.
 Data: < j{&#170;&#252;           > 80 6A 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001FCAA7B5610, 16 bytes long.
 Data: <Pi{&#170;&#252;           > 50 69 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001FCAA7B6950, 40 bytes long.
 Data: < V{&#170;&#252;   &#224;_d&#172;&#252;   > 10 56 7B AA FC 01 00 00 E0 5F 64 AC FC 01 00 00 
{262} normal block at 0x000001FCAA7B5390, 16 bytes long.
 Data: <`j{&#170;&#252;           > 60 6A 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001FCAA7B5BB0, 16 bytes long.
 Data: <8j{&#170;&#252;           > 38 6A 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001FCAA7B0360, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x000001FCAA7B5430, 16 bytes long.
 Data: < j{&#170;&#252;           > 10 6A 7B AA FC 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001FCAA7B6A10, 992 bytes long.
 Data: <0T{&#170;&#252;   ` {&#170;&#252;   > 30 54 7B AA FC 01 00 00 60 03 7B AA FC 01 00 00 
{94} normal block at 0x000001FCAA7B0000, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000001FCAA7AD8A0, 16 bytes long.
 Data: <&#160;&#199;y&#170;&#252;           > A0 C7 79 AA FC 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000001FCAA79C7A0, 40 bytes long.
 Data: <&#160;&#216;z&#170;&#252;     {&#170;&#252;   > A0 D8 7A AA FC 01 00 00 00 00 7B AA FC 01 00 00 
{71} normal block at 0x000001FCAA7AE250, 16 bytes long.
 Data: < &#234;&#158;;&#246;           > 80 EA 9E 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001FCAA7ADE40, 16 bytes long.
 Data: <@&#233;&#158;;&#246;           > 40 E9 9E 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001FCAA7AD620, 16 bytes long.
 Data: <&#248;W&#155;;&#246;           > F8 57 9B 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001FCAA7ADFD0, 16 bytes long.
 Data: <&#216;W&#155;;&#246;           > D8 57 9B 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001FCAA7AD3F0, 16 bytes long.
 Data: <P &#155;;&#246;           > 50 04 9B 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001FCAA7AE1B0, 16 bytes long.
 Data: <0 &#155;;&#246;           > 30 04 9B 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001FCAA7AD800, 16 bytes long.
 Data: <&#224; &#155;;&#246;           > E0 02 9B 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001FCAA7ADBC0, 16 bytes long.
 Data: <  &#155;;&#246;           > 10 04 9B 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001FCAA7ADF30, 16 bytes long.
 Data: <p &#155;;&#246;           > 70 04 9B 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001FCAA7ADEE0, 16 bytes long.
 Data: < &#192; ;&#246;           > 18 C0 99 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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