Task 38636546

Name p38_3_A14_A20_r0_1-QUICO_ATM_OpenFF_NAGL_p38_3-3-6-RND8307_0
Workunit 31584776
Created 29 Apr 2026, 7:08:42 UTC
Sent 29 Apr 2026, 7:09:07 UTC
Report deadline 4 May 2026, 7:09:07 UTC
Received 1 May 2026, 0:17:59 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 575758
Run time 21 hours 50 min 57 sec
CPU time 19 hours 15 min 15 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 7,070.50 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 482.88 MB
Peak swap size 5.27 GB
Peak disk usage 3.08 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
02:57:21 (77324): wrapper (7.9.26016): starting
02:57:21 (77324): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A14_A20_0.pdb
QB_A14_A20_0.xml
QB_A14_A20.inpcrd
QB_A14_A20_input.yaml
QB_A14_A20.pdb
QB_A14_A20.prmtop
QB_A14_A20_sys.xml
run.bat
run.sh
02:57:26 (77324): Library/usr/bin/tar.exe exited; CPU time 0.015625
02:57:26 (77324): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\10\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\10\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
02:14:58 (77324): C:/Windows/system32/cmd.exe exited; CPU time 69315.421875
02:14:58 (77324): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 1711976467 bytes.
Dumping objects ->
{3835453} normal block at 0x000002A98A619B90, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835442} normal block at 0x000002A98A619B20, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835431} normal block at 0x000002A98A619DC0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835420} normal block at 0x000002A98A619490, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835409} normal block at 0x000002A98A618EE0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835378} normal block at 0x000002A98C2E49A0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835365} normal block at 0x000002A98A5ED760, 8 bytes long.
 Data: <  \&#138;&#169;   > 00 00 5C 8A A9 02 00 00 
{3833975} normal block at 0x000002A98A5ED710, 8 bytes long.
 Data: <0&#221;]&#138;&#169;   > 30 DD 5D 8A A9 02 00 00 
..\zip\boinc_zip.cpp(122) : {319} normal block at 0x000002A98A5E1520, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{304} normal block at 0x000002A98A5E2610, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{303} normal block at 0x000002A98A5F6750, 16 bytes long.
 Data: < m_&#138;&#169;           > 18 6D 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x000002A98A5F60C0, 16 bytes long.
 Data: <&#240;l_&#138;&#169;           > F0 6C 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x000002A98A5F0150, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{300} normal block at 0x000002A98A5F6700, 16 bytes long.
 Data: <&#200;l_&#138;&#169;           > C8 6C 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000002A98A5F6070, 16 bytes long.
 Data: <&#160;l_&#138;&#169;           > A0 6C 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000002A98A5F66B0, 16 bytes long.
 Data: <xl_&#138;&#169;           > 78 6C 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000002A98A5F5B20, 16 bytes long.
 Data: <Pl_&#138;&#169;           > 50 6C 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000002A98A5F1650, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{295} normal block at 0x000002A98A5F6390, 16 bytes long.
 Data: <X ^&#138;&#169;           > 58 03 5E 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000002A98A5EFD90, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{293} normal block at 0x000002A98A5F6020, 16 bytes long.
 Data: <0 ^&#138;&#169;           > 30 03 5E 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002A98A5F62A0, 16 bytes long.
 Data: <  ^&#138;&#169;           > 08 03 5E 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002A98A5F6980, 16 bytes long.
 Data: <&#224; ^&#138;&#169;           > E0 02 5E 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002A98A5F6890, 16 bytes long.
 Data: <&#184; ^&#138;&#169;           > B8 02 5E 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002A98A5F6660, 16 bytes long.
 Data: <  ^&#138;&#169;           > 90 02 5E 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002A98A5F5FD0, 16 bytes long.
 Data: <h ^&#138;&#169;           > 68 02 5E 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002A98A5EF8B0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{285} normal block at 0x000002A98A5F67A0, 16 bytes long.
 Data: <@ ^&#138;&#169;           > 40 02 5E 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002A98A5E0240, 320 bytes long.
 Data: <&#160;g_&#138;&#169;   &#176;&#248;^&#138;&#169;   > A0 67 5F 8A A9 02 00 00 B0 F8 5E 8A A9 02 00 00 
{283} normal block at 0x000002A98A5F64D0, 16 bytes long.
 Data: <0l_&#138;&#169;           > 30 6C 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002A98A5F5EE0, 16 bytes long.
 Data: < l_&#138;&#169;           > 08 6C 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002A98A5EF970, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{280} normal block at 0x000002A98A5F5DF0, 16 bytes long.
 Data: <&#224;k_&#138;&#169;           > E0 6B 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002A98A5F0570, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{278} normal block at 0x000002A98A5F6430, 16 bytes long.
 Data: <(k_&#138;&#169;           > 28 6B 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002A98A5F5DA0, 16 bytes long.
 Data: < k_&#138;&#169;           > 00 6B 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002A98A5F5D00, 16 bytes long.
 Data: <&#216;j_&#138;&#169;           > D8 6A 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002A98A5F6610, 16 bytes long.
 Data: <&#176;j_&#138;&#169;           > B0 6A 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002A98A5F6480, 16 bytes long.
 Data: < j_&#138;&#169;           > 88 6A 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002A98A5F6570, 16 bytes long.
 Data: <`j_&#138;&#169;           > 60 6A 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002A98A5F5CB0, 16 bytes long.
 Data: <  _&#138;&#169;           > 80 18 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002A98A5F1880, 40 bytes long.
 Data: <&#176;\_&#138;&#169;   &#160;I.&#140;&#169;   > B0 5C 5F 8A A9 02 00 00 A0 49 2E 8C A9 02 00 00 
{269} normal block at 0x000002A98A5F5F80, 16 bytes long.
 Data: <@j_&#138;&#169;           > 40 6A 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002A98A5F6200, 16 bytes long.
 Data: < j_&#138;&#169;           > 18 6A 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002A98A5F0510, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{266} normal block at 0x000002A98A5F5C60, 16 bytes long.
 Data: <&#240;i_&#138;&#169;           > F0 69 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002A98A5F69F0, 992 bytes long.
 Data: <`\_&#138;&#169;     _&#138;&#169;   > 60 5C 5F 8A A9 02 00 00 10 05 5F 8A A9 02 00 00 
{101} normal block at 0x000002A98A5EFBB0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{100} normal block at 0x000002A98A5ED530, 16 bytes long.
 Data: <&#160; _&#138;&#169;           > A0 17 5F 8A A9 02 00 00 00 00 00 00 00 00 00 00 
{99} normal block at 0x000002A98A5F17A0, 40 bytes long.
 Data: <0&#213;^&#138;&#169;   &#176;&#251;^&#138;&#169;   > 30 D5 5E 8A A9 02 00 00 B0 FB 5E 8A A9 02 00 00 
{78} normal block at 0x000002A98A5EDA80, 16 bytes long.
 Data: < &#234;l&#158;&#247;           > 80 EA 6C 9E F7 7F 00 00 00 00 00 00 00 00 00 00 
{77} normal block at 0x000002A98A5EDF30, 16 bytes long.
 Data: <@&#233;l&#158;&#247;           > 40 E9 6C 9E F7 7F 00 00 00 00 00 00 00 00 00 00 
{76} normal block at 0x000002A98A5ED4E0, 16 bytes long.
 Data: <&#248;Wi&#158;&#247;           > F8 57 69 9E F7 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x000002A98A5EDEE0, 16 bytes long.
 Data: <&#216;Wi&#158;&#247;           > D8 57 69 9E F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x000002A98A5EE070, 16 bytes long.
 Data: <P i&#158;&#247;           > 50 04 69 9E F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000002A98A5EE200, 16 bytes long.
 Data: <0 i&#158;&#247;           > 30 04 69 9E F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000002A98A5ED670, 16 bytes long.
 Data: <&#224; i&#158;&#247;           > E0 02 69 9E F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000002A98A5EDC10, 16 bytes long.
 Data: <  i&#158;&#247;           > 10 04 69 9E F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002A98A5EE2A0, 16 bytes long.
 Data: <p i&#158;&#247;           > 70 04 69 9E F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002A98A5ED620, 16 bytes long.
 Data: < &#192;g&#158;&#247;           > 18 C0 67 9E F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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