Task 38635692

Name HIF2A_2_A28_A11_r0_1-QUICO_ATM_GAFF2_NAGL_hif2a_2-2-6-RND6674_1
Workunit 31575651
Created 28 Apr 2026, 17:03:24 UTC
Sent 28 Apr 2026, 17:03:31 UTC
Report deadline 3 May 2026, 17:03:31 UTC
Received 29 Apr 2026, 14:35:09 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 651976
Run time 3 hours 32 min 4 sec
CPU time 3 hours 32 min 4 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 50,494.97 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 468.72 MB
Peak swap size 12.64 GB
Peak disk usage 2.90 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
12:41:46 (46488): wrapper (7.9.26016): starting
12:41:46 (46488): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A28_A11_0.pdb
QB_A28_A11_0.xml
QB_A28_A11.inpcrd
QB_A28_A11_input.yaml
QB_A28_A11.pdb
QB_A28_A11.prmtop
QB_A28_A11_sys.xml
run.bat
run.sh
12:41:47 (46488): Library/usr/bin/tar.exe exited; CPU time 0.015625
12:41:47 (46488): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'c:\Boinc\004\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'c:\Boinc\004\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
16:33:54 (46488): C:/Windows/system32/cmd.exe exited; CPU time 12724.140625
16:33:54 (46488): called boinc_finish(0)
0 bytes in 0 Free Blocks.
456 bytes in 8 Normal Blocks.
2288 bytes in 2 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 407892559 bytes.
Dumping objects ->
{3835645} normal block at 0x000001F39F194A20, 48 bytes long.
 Data: <PATH=c:\boinc\00> 50 41 54 48 3D 63 3A 5C 62 6F 69 6E 63 5C 30 30 
{3835634} normal block at 0x000001F3A0E605F0, 32 bytes long.
 Data: <HOME=c:\boinc\00> 48 4F 4D 45 3D 63 3A 5C 62 6F 69 6E 63 5C 30 30 
{3835623} normal block at 0x000001F3A0E60470, 32 bytes long.
 Data: <TMP=c:\boinc\004> 54 4D 50 3D 63 3A 5C 62 6F 69 6E 63 5C 30 30 34 
{3835612} normal block at 0x000001F3A0E5F0F0, 32 bytes long.
 Data: <TEMP=c:\boinc\00> 54 45 4D 50 3D 63 3A 5C 62 6F 69 6E 63 5C 30 30 
{3835601} normal block at 0x000001F3A0E60410, 32 bytes long.
 Data: <TMPDIR=c:\boinc\> 54 4D 50 44 49 52 3D 63 3A 5C 62 6F 69 6E 63 5C 
{3835570} normal block at 0x000001F39F194B70, 48 bytes long.
 Data: <PATH=c:\boinc\00> 50 41 54 48 3D 63 3A 5C 62 6F 69 6E 63 5C 30 30 
{3835559} normal block at 0x000001F39F1F9980, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835556} normal block at 0x000001F39F18D570, 8 bytes long.
 Data: <  &#190;&#160;&#243;   > 00 00 BE A0 F3 01 00 00 
{3834731} normal block at 0x000001F39F1FA340, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833967} normal block at 0x000001F39F18D4D0, 8 bytes long.
 Data: <p&#215; &#159;&#243;   > 70 D7 17 9F F3 01 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x000001F39F180B60, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000001F39F182160, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x000001F39F1959D0, 16 bytes long.
 Data: <xf &#159;&#243;           > 78 66 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001F39F195B10, 16 bytes long.
 Data: <Pf &#159;&#243;           > 50 66 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001F39F1916A0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x000001F39F1954D0, 16 bytes long.
 Data: <(f &#159;&#243;           > 28 66 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001F39F195750, 16 bytes long.
 Data: < f &#159;&#243;           > 00 66 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001F39F195F70, 16 bytes long.
 Data: <&#216;e &#159;&#243;           > D8 65 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001F39F195980, 16 bytes long.
 Data: <&#176;e &#159;&#243;           > B0 65 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001F39F1947F0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x000001F39F196240, 16 bytes long.
 Data: <&#200;&#242; &#159;&#243;           > C8 F2 17 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001F39F1915E0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x000001F39F195CA0, 16 bytes long.
 Data: <&#160;&#242; &#159;&#243;           > A0 F2 17 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001F39F195700, 16 bytes long.
 Data: <x&#242; &#159;&#243;           > 78 F2 17 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001F39F195480, 16 bytes long.
 Data: <P&#242; &#159;&#243;           > 50 F2 17 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001F39F1955C0, 16 bytes long.
 Data: <(&#242; &#159;&#243;           > 28 F2 17 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001F39F1961F0, 16 bytes long.
 Data: < &#242; &#159;&#243;           > 00 F2 17 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001F39F195ED0, 16 bytes long.
 Data: <&#216;&#241; &#159;&#243;           > D8 F1 17 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001F39F190980, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x000001F39F1961A0, 16 bytes long.
 Data: <&#176;&#241; &#159;&#243;           > B0 F1 17 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001F39F17F1B0, 320 bytes long.
 Data: <&#160;a &#159;&#243;    	 &#159;&#243;   > A0 61 19 9F F3 01 00 00 80 09 19 9F F3 01 00 00 
{279} normal block at 0x000001F39F195430, 16 bytes long.
 Data: < e &#159;&#243;           > 90 65 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001F39F195660, 16 bytes long.
 Data: <he &#159;&#243;           > 68 65 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001F39F190E60, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x000001F39F195E80, 16 bytes long.
 Data: <@e &#159;&#243;           > 40 65 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001F39F190CE0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x000001F39F196060, 16 bytes long.
 Data: < d &#159;&#243;           > 88 64 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001F39F195570, 16 bytes long.
 Data: <`d &#159;&#243;           > 60 64 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001F39F195840, 16 bytes long.
 Data: <8d &#159;&#243;           > 38 64 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001F39F195A20, 16 bytes long.
 Data: < d &#159;&#243;           > 10 64 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001F39F195930, 16 bytes long.
 Data: <&#232;c &#159;&#243;           > E8 63 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001F39F196150, 16 bytes long.
 Data: <&#192;c &#159;&#243;           > C0 63 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001F39F195C50, 16 bytes long.
 Data: <&#192;L &#159;&#243;           > C0 4C 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001F39F194CC0, 40 bytes long.
 Data: <P\ &#159;&#243;   pK &#159;&#243;   > 50 5C 19 9F F3 01 00 00 70 4B 19 9F F3 01 00 00 
{265} normal block at 0x000001F39F195C00, 16 bytes long.
 Data: <&#160;c &#159;&#243;           > A0 63 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001F39F1957F0, 16 bytes long.
 Data: <xc &#159;&#243;           > 78 63 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001F39F191580, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x000001F39F196100, 16 bytes long.
 Data: <Pc &#159;&#243;           > 50 63 19 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001F39F196350, 992 bytes long.
 Data: < a &#159;&#243;      &#159;&#243;   > 00 61 19 9F F3 01 00 00 80 15 19 9F F3 01 00 00 
{97} normal block at 0x000001F39F190BC0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x000001F39F18D520, 16 bytes long.
 Data: <`&#229; &#159;&#243;           > 60 E5 17 9F F3 01 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x000001F39F17E560, 40 bytes long.
 Data: < &#213; &#159;&#243;   &#192;  &#159;&#243;   > 20 D5 18 9F F3 01 00 00 C0 0B 19 9F F3 01 00 00 
{74} normal block at 0x000001F39F18DBB0, 16 bytes long.
 Data: < &#234;d&#222;&#246;           > 80 EA 64 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001F39F18D340, 16 bytes long.
 Data: <@&#233;d&#222;&#246;           > 40 E9 64 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001F39F18DC50, 16 bytes long.
 Data: <&#248;Wa&#222;&#246;           > F8 57 61 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001F39F18D7A0, 16 bytes long.
 Data: <&#216;Wa&#222;&#246;           > D8 57 61 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001F39F18D480, 16 bytes long.
 Data: <P a&#222;&#246;           > 50 04 61 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001F39F18DB10, 16 bytes long.
 Data: <0 a&#222;&#246;           > 30 04 61 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001F39F18DA70, 16 bytes long.
 Data: <&#224; a&#222;&#246;           > E0 02 61 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001F39F18CEE0, 16 bytes long.
 Data: <  a&#222;&#246;           > 10 04 61 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001F39F18DE30, 16 bytes long.
 Data: <p a&#222;&#246;           > 70 04 61 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001F39F18DC00, 16 bytes long.
 Data: < &#192;_&#222;&#246;           > 18 C0 5F DE F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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