Task 38600700

Name PTP1B_A08_A07_r0_1-QUICO_ATM_GAFF2_NAGL_PTP1B-4-6-RND8628_0
Workunit 31555377
Created 9 Apr 2026, 6:12:32 UTC
Sent 9 Apr 2026, 6:12:35 UTC
Report deadline 14 Apr 2026, 6:12:35 UTC
Received 9 Apr 2026, 10:34:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 556595
Run time 2 hours 12 min 36 sec
CPU time 2 hours 12 min 36 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 35,921.84 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 595.17 MB
Peak swap size 12.76 GB
Peak disk usage 2.97 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
03:25:47 (40556): wrapper (7.9.26016): starting
03:25:47 (40556): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A08_A07_0.pdb
QB_A08_A07_0.xml
QB_A08_A07.inpcrd
QB_A08_A07_input.yaml
QB_A08_A07.pdb
QB_A08_A07.prmtop
QB_A08_A07_sys.xml
run.bat
run.sh
03:25:48 (40556): Library/usr/bin/tar.exe exited; CPU time 0.000000
03:25:48 (40556): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
05:34:16 (40556): C:/Windows/system32/cmd.exe exited; CPU time 7956.281250
05:34:16 (40556): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 146211521 bytes.
Dumping objects ->
{3835538} normal block at 0x00000217C93B4C10, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835527} normal block at 0x00000217C93B4C80, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835516} normal block at 0x00000217C93B4890, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835505} normal block at 0x00000217C93B4BA0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835494} normal block at 0x00000217C93B4900, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835463} normal block at 0x00000217CB14A480, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835452} normal block at 0x00000217CB15DEC0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835449} normal block at 0x00000217C93AD6E0, 8 bytes long.
 Data: <  6&#201;    > 00 00 36 C9 17 02 00 00 
{3834671} normal block at 0x00000217CB15DF70, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833943} normal block at 0x00000217C93ADC80, 8 bytes long.
 Data: <&#224;C &#203;    > E0 43 1A CB 17 02 00 00 
..\zip\boinc_zip.cpp(122) : {303} normal block at 0x00000217C93A0CD0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000217C93A23C0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{287} normal block at 0x00000217C93B61D0, 16 bytes long.
 Data: <&#168;f;&#201;            > A8 66 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000217C93B5DC0, 16 bytes long.
 Data: < f;&#201;            > 80 66 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000217C93B0530, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{284} normal block at 0x00000217C93B5E60, 16 bytes long.
 Data: <Xf;&#201;            > 58 66 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000217C93B5D70, 16 bytes long.
 Data: <0f;&#201;            > 30 66 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000217C93B62C0, 16 bytes long.
 Data: < f;&#201;            > 08 66 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000217C93B6270, 16 bytes long.
 Data: <&#224;e;&#201;            > E0 65 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000217C93B4A50, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{279} normal block at 0x00000217C93B5640, 16 bytes long.
 Data: < &#251;9&#201;            > 18 FB 39 C9 17 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000217C93B05F0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{277} normal block at 0x00000217C93B59B0, 16 bytes long.
 Data: <&#240;&#250;9&#201;            > F0 FA 39 C9 17 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000217C93B6130, 16 bytes long.
 Data: <&#200;&#250;9&#201;            > C8 FA 39 C9 17 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000217C93B5B90, 16 bytes long.
 Data: <&#160;&#250;9&#201;            > A0 FA 39 C9 17 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000217C93B5460, 16 bytes long.
 Data: <x&#250;9&#201;            > 78 FA 39 C9 17 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000217C93B5B40, 16 bytes long.
 Data: <P&#250;9&#201;            > 50 FA 39 C9 17 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000217C93B5690, 16 bytes long.
 Data: <(&#250;9&#201;            > 28 FA 39 C9 17 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000217C93B1250, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{269} normal block at 0x00000217C93B5500, 16 bytes long.
 Data: < &#250;9&#201;            > 00 FA 39 C9 17 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000217C939FA00, 320 bytes long.
 Data: < U;&#201;    P ;&#201;    > 00 55 3B C9 17 02 00 00 50 12 3B C9 17 02 00 00 
{267} normal block at 0x00000217C93B5F00, 16 bytes long.
 Data: <&#192;e;&#201;            > C0 65 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000217C93B5D20, 16 bytes long.
 Data: < e;&#201;            > 98 65 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000217C93B0A10, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{264} normal block at 0x00000217C93B5E10, 16 bytes long.
 Data: <pe;&#201;            > 70 65 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000217C93B0B90, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{262} normal block at 0x00000217C93B55A0, 16 bytes long.
 Data: <&#184;d;&#201;            > B8 64 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000217C93B6180, 16 bytes long.
 Data: < d;&#201;            > 90 64 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000217C93B5F50, 16 bytes long.
 Data: <hd;&#201;            > 68 64 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000217C93B5410, 16 bytes long.
 Data: <@d;&#201;            > 40 64 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000217C93B5AF0, 16 bytes long.
 Data: < d;&#201;            > 18 64 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000217C93B5910, 16 bytes long.
 Data: <&#240;c;&#201;            > F0 63 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x00000217C93B57D0, 16 bytes long.
 Data: <`M;&#201;            > 60 4D 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x00000217C93B4D60, 40 bytes long.
 Data: <&#208;W;&#201;     &#164; &#203;    > D0 57 3B C9 17 02 00 00 80 A4 14 CB 17 02 00 00 
{253} normal block at 0x00000217C93B5960, 16 bytes long.
 Data: <&#208;c;&#201;            > D0 63 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x00000217C93B5730, 16 bytes long.
 Data: <&#168;c;&#201;            > A8 63 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x00000217C93B0AD0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{250} normal block at 0x00000217C93B5FF0, 16 bytes long.
 Data: < c;&#201;            > 80 63 3B C9 17 02 00 00 00 00 00 00 00 00 00 00 
{249} normal block at 0x00000217C93B6380, 992 bytes long.
 Data: <&#240;_;&#201;    &#208; ;&#201;    > F0 5F 3B C9 17 02 00 00 D0 0A 3B C9 17 02 00 00 
{85} normal block at 0x00000217C93B0A70, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{84} normal block at 0x00000217C93AD0A0, 16 bytes long.
 Data: < &#199;9&#201;            > 00 C7 39 C9 17 02 00 00 00 00 00 00 00 00 00 00 
{83} normal block at 0x00000217C939C700, 40 bytes long.
 Data: <&#160;&#208;:&#201;    p ;&#201;    > A0 D0 3A C9 17 02 00 00 70 0A 3B C9 17 02 00 00 
{62} normal block at 0x00000217C93AD1E0, 16 bytes long.
 Data: < &#234;&#132; &#246;           > 80 EA 84 11 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000217C93AD320, 16 bytes long.
 Data: <@&#233;&#132; &#246;           > 40 E9 84 11 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000217C93AD000, 16 bytes long.
 Data: <&#248;W  &#246;           > F8 57 81 11 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000217C93AD0F0, 16 bytes long.
 Data: <&#216;W  &#246;           > D8 57 81 11 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000217C93AD730, 16 bytes long.
 Data: <P   &#246;           > 50 04 81 11 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x00000217C93ACEC0, 16 bytes long.
 Data: <0   &#246;           > 30 04 81 11 F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x00000217C93AD7D0, 16 bytes long.
 Data: <&#224;   &#246;           > E0 02 81 11 F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x00000217C93ACE70, 16 bytes long.
 Data: <    &#246;           > 10 04 81 11 F6 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x00000217C93ADB40, 16 bytes long.
 Data: <p   &#246;           > 70 04 81 11 F6 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x00000217C93ADDC0, 16 bytes long.
 Data: < &#192;  &#246;           > 18 C0 7F 11 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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