Task 38600046

Name TYK2_A06_A01_r0_2-QUICO_ATM_GAFF2_NAGL_TYK2-4-5-RND0821_1
Workunit 31554803
Created 8 Apr 2026, 23:30:47 UTC
Sent 8 Apr 2026, 23:30:50 UTC
Report deadline 13 Apr 2026, 23:30:50 UTC
Received 9 Apr 2026, 3:23:41 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 646261
Run time 3 hours 42 min 46 sec
CPU time 3 hours 42 min 46 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 39,054.20 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 708.13 MB
Peak swap size 13.04 GB
Peak disk usage 3.06 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
01:34:30 (83608): wrapper (7.9.26016): starting
01:34:30 (83608): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A06_A01_0.pdb
QB_A06_A01_0.xml
QB_A06_A01.inpcrd
QB_A06_A01_input.yaml
QB_A06_A01.pdb
QB_A06_A01.prmtop
QB_A06_A01_sys.xml
run.bat
run.sh
01:34:31 (83608): Library/usr/bin/tar.exe exited; CPU time 0.031250
01:34:31 (83608): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
05:23:24 (83608): C:/Windows/system32/cmd.exe exited; CPU time 13366.453125
05:23:24 (83608): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 245212897 bytes.
Dumping objects ->
{3835515} normal block at 0x000001DB28F2C040, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835504} normal block at 0x000001DB28F2C0B0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835493} normal block at 0x000001DB28F2C740, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835482} normal block at 0x000001DB27301480, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835471} normal block at 0x000001DB27301410, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835440} normal block at 0x000001DB28F79300, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835427} normal block at 0x000001DB272FD7E0, 8 bytes long.
 Data: <  *'&#219;   > 00 00 2A 27 DB 01 00 00 
{3833963} normal block at 0x000001DB272FDD80, 8 bytes long.
 Data: <&#240;&#162;2'&#219;   > F0 A2 32 27 DB 01 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x000001DB272F0CE0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001DB272F1CF0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x000001DB27304EF0, 16 bytes long.
 Data: <&#232;`0'&#219;           > E8 60 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001DB273050D0, 16 bytes long.
 Data: <&#192;`0'&#219;           > C0 60 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001DB272FF8F0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x000001DB273056C0, 16 bytes long.
 Data: < `0'&#219;           > 98 60 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001DB27305440, 16 bytes long.
 Data: <p`0'&#219;           > 70 60 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001DB27305C60, 16 bytes long.
 Data: <H`0'&#219;           > 48 60 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001DB27305B20, 16 bytes long.
 Data: < `0'&#219;           > 20 60 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001DB27301100, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x000001DB27305D00, 16 bytes long.
 Data: <&#200;&#246;.'&#219;           > C8 F6 2E 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001DB27300310, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x000001DB27305990, 16 bytes long.
 Data: <&#160;&#246;.'&#219;           > A0 F6 2E 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001DB27304EA0, 16 bytes long.
 Data: <x&#246;.'&#219;           > 78 F6 2E 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001DB27305760, 16 bytes long.
 Data: <P&#246;.'&#219;           > 50 F6 2E 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001DB27305CB0, 16 bytes long.
 Data: <(&#246;.'&#219;           > 28 F6 2E 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001DB273053A0, 16 bytes long.
 Data: < &#246;.'&#219;           > 00 F6 2E 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001DB27305300, 16 bytes long.
 Data: <&#216;&#245;.'&#219;           > D8 F5 2E 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001DB272FFBF0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x000001DB27305940, 16 bytes long.
 Data: <&#176;&#245;.'&#219;           > B0 F5 2E 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001DB272EF5B0, 320 bytes long.
 Data: <@Y0'&#219;   &#240;&#251;/'&#219;   > 40 59 30 27 DB 01 00 00 F0 FB 2F 27 DB 01 00 00 
{277} normal block at 0x000001DB273052B0, 16 bytes long.
 Data: < `0'&#219;           > 00 60 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001DB273054E0, 16 bytes long.
 Data: <&#216;_0'&#219;           > D8 5F 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001DB27300010, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x000001DB27305170, 16 bytes long.
 Data: <&#176;_0'&#219;           > B0 5F 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001DB273005B0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x000001DB273055D0, 16 bytes long.
 Data: <&#248;^0'&#219;           > F8 5E 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001DB27305670, 16 bytes long.
 Data: <&#208;^0'&#219;           > D0 5E 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001DB273051C0, 16 bytes long.
 Data: <&#168;^0'&#219;           > A8 5E 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001DB27305C10, 16 bytes long.
 Data: < ^0'&#219;           > 80 5E 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001DB27305A80, 16 bytes long.
 Data: <X^0'&#219;           > 58 5E 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001DB27305260, 16 bytes long.
 Data: <0^0'&#219;           > 30 5E 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001DB27305620, 16 bytes long.
 Data: <  0'&#219;           > 20 10 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001DB27301020, 40 bytes long.
 Data: < V0'&#219;    &#147;&#247;(&#219;   > 20 56 30 27 DB 01 00 00 00 93 F7 28 DB 01 00 00 
{263} normal block at 0x000001DB273059E0, 16 bytes long.
 Data: < ^0'&#219;           > 10 5E 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001DB27305210, 16 bytes long.
 Data: <&#232;]0'&#219;           > E8 5D 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001DB273004F0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x000001DB27304F90, 16 bytes long.
 Data: <&#192;]0'&#219;           > C0 5D 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001DB27305DC0, 992 bytes long.
 Data: < O0'&#219;   &#240; 0'&#219;   > 90 4F 30 27 DB 01 00 00 F0 04 30 27 DB 01 00 00 
{95} normal block at 0x000001DB27300490, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x000001DB272FDCE0, 16 bytes long.
 Data: <P 0'&#219;           > 50 12 30 27 DB 01 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x000001DB27301250, 40 bytes long.
 Data: <&#224;&#220;/'&#219;     0'&#219;   > E0 DC 2F 27 DB 01 00 00 90 04 30 27 DB 01 00 00 
{72} normal block at 0x000001DB272FD6A0, 16 bytes long.
 Data: < &#234; "&#246;           > 80 EA 20 22 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001DB272FD740, 16 bytes long.
 Data: <@&#233; "&#246;           > 40 E9 20 22 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001DB272FD9C0, 16 bytes long.
 Data: <&#248;W "&#246;           > F8 57 1D 22 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001DB272FD600, 16 bytes long.
 Data: <&#216;W "&#246;           > D8 57 1D 22 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001DB272FDE20, 16 bytes long.
 Data: <P  "&#246;           > 50 04 1D 22 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001DB272FDC40, 16 bytes long.
 Data: <0  "&#246;           > 30 04 1D 22 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001DB272FE2D0, 16 bytes long.
 Data: <&#224;  "&#246;           > E0 02 1D 22 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001DB272FE280, 16 bytes long.
 Data: <   "&#246;           > 10 04 1D 22 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001DB272FDD30, 16 bytes long.
 Data: <p  "&#246;           > 70 04 1D 22 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001DB272FE500, 16 bytes long.
 Data: < &#192; "&#246;           > 18 C0 1B 22 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra