Task 38599486

Name PTP1B_A12_A04_r0_1-QUICO_ATM_GAFF2_NAGL_PTP1B-2-6-RND7700_0
Workunit 31554397
Created 8 Apr 2026, 18:20:20 UTC
Sent 8 Apr 2026, 18:20:27 UTC
Report deadline 13 Apr 2026, 18:20:27 UTC
Received 8 Apr 2026, 22:10:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 642776
Run time 3 hours 50 min 4 sec
CPU time 3 hours 52 min 48 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 31,078.53 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 628.87 MB
Peak swap size 12.85 GB
Peak disk usage 3.00 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
20:22:34 (33476): wrapper (7.9.26016): starting
20:22:34 (33476): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A12_A04_0.pdb
QB_A12_A04_0.xml
QB_A12_A04.inpcrd
QB_A12_A04_input.yaml
QB_A12_A04.pdb
QB_A12_A04.prmtop
QB_A12_A04_sys.xml
run.bat
run.sh
20:22:36 (33476): Library/usr/bin/tar.exe exited; CPU time 0.000000
20:22:36 (33476): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
00:10:05 (33476): C:/Windows/system32/cmd.exe exited; CPU time 13968.859375
00:10:05 (33476): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 208195341 bytes.
Dumping objects ->
{3835318} normal block at 0x000001F87082DCB0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835307} normal block at 0x000001F87082DD20, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835296} normal block at 0x000001F87082D930, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835285} normal block at 0x000001F87082E500, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835274} normal block at 0x000001F86E134E10, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835243} normal block at 0x000001F870876E30, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835232} normal block at 0x000001F87088F660, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835229} normal block at 0x000001F86E129D80, 8 bytes long.
 Data: <   n&#248;   > 00 00 0D 6E F8 01 00 00 
{3834583} normal block at 0x000001F87088EAB0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833969} normal block at 0x000001F86E128F70, 8 bytes long.
 Data: <&#176;&#159; n&#248;   > B0 9F 15 6E F8 01 00 00 
..\zip\boinc_zip.cpp(122) : {316} normal block at 0x000001F86E121500, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x000001F86E12A850, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x000001F86E136270, 16 bytes long.
 Data: <Xu n&#248;           > 58 75 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000001F86E136360, 16 bytes long.
 Data: <0u n&#248;           > 30 75 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001F86E132C80, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x000001F86E136C70, 16 bytes long.
 Data: < u n&#248;           > 08 75 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001F86E136EF0, 16 bytes long.
 Data: <&#224;t n&#248;           > E0 74 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001F86E1369A0, 16 bytes long.
 Data: <&#184;t n&#248;           > B8 74 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001F86E136C20, 16 bytes long.
 Data: < t n&#248;           > 90 74 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001F86E134F60, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x000001F86E136B30, 16 bytes long.
 Data: <x  n&#248;           > 78 07 12 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001F86E132200, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x000001F86E1369F0, 16 bytes long.
 Data: <P  n&#248;           > 50 07 12 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001F86E1368B0, 16 bytes long.
 Data: <(  n&#248;           > 28 07 12 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001F86E136A40, 16 bytes long.
 Data: <   n&#248;           > 00 07 12 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001F86E136400, 16 bytes long.
 Data: <&#216;  n&#248;           > D8 06 12 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001F86E136950, 16 bytes long.
 Data: <&#176;  n&#248;           > B0 06 12 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001F86E136680, 16 bytes long.
 Data: <   n&#248;           > 88 06 12 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001F86E132AA0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{282} normal block at 0x000001F86E136EA0, 16 bytes long.
 Data: <`  n&#248;           > 60 06 12 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001F86E120660, 320 bytes long.
 Data: <&#160;n n&#248;   &#160;* n&#248;   > A0 6E 13 6E F8 01 00 00 A0 2A 13 6E F8 01 00 00 
{280} normal block at 0x000001F86E136450, 16 bytes long.
 Data: <pt n&#248;           > 70 74 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001F86E136E50, 16 bytes long.
 Data: <Ht n&#248;           > 48 74 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001F86E131F60, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x000001F86E136A90, 16 bytes long.
 Data: < t n&#248;           > 20 74 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001F86E1329E0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x000001F86E136D60, 16 bytes long.
 Data: <hs n&#248;           > 68 73 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001F86E136720, 16 bytes long.
 Data: <@s n&#248;           > 40 73 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001F86E136BD0, 16 bytes long.
 Data: < s n&#248;           > 18 73 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001F86E136CC0, 16 bytes long.
 Data: <&#240;r n&#248;           > F0 72 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001F86E1371C0, 16 bytes long.
 Data: <&#200;r n&#248;           > C8 72 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001F86E137080, 16 bytes long.
 Data: <&#160;r n&#248;           > A0 72 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001F86E136B80, 16 bytes long.
 Data: < J n&#248;           > 90 4A 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001F86E134A90, 40 bytes long.
 Data: < k n&#248;   0n&#135;p&#248;   > 80 6B 13 6E F8 01 00 00 30 6E 87 70 F8 01 00 00 
{266} normal block at 0x000001F86E1366D0, 16 bytes long.
 Data: < r n&#248;           > 80 72 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001F86E137170, 16 bytes long.
 Data: <Xr n&#248;           > 58 72 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001F86E1321A0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x000001F86E136AE0, 16 bytes long.
 Data: <0r n&#248;           > 30 72 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001F86E137230, 992 bytes long.
 Data: <&#224;j n&#248;   &#160;! n&#248;   > E0 6A 13 6E F8 01 00 00 A0 21 13 6E F8 01 00 00 
{98} normal block at 0x000001F86E132A40, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x000001F86E129BA0, 16 bytes long.
 Data: <0M n&#248;           > 30 4D 13 6E F8 01 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x000001F86E134D30, 40 bytes long.
 Data: <&#160;&#155; n&#248;   @* n&#248;   > A0 9B 12 6E F8 01 00 00 40 2A 13 6E F8 01 00 00 
{75} normal block at 0x000001F86E1294C0, 16 bytes long.
 Data: < &#234;V-&#246;           > 80 EA 56 2D F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x000001F86E129880, 16 bytes long.
 Data: <@&#233;V-&#246;           > 40 E9 56 2D F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001F86E1299C0, 16 bytes long.
 Data: <&#248;WS-&#246;           > F8 57 53 2D F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001F86E128F20, 16 bytes long.
 Data: <&#216;WS-&#246;           > D8 57 53 2D F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001F86E129D30, 16 bytes long.
 Data: <P S-&#246;           > 50 04 53 2D F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001F86E129C90, 16 bytes long.
 Data: <0 S-&#246;           > 30 04 53 2D F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001F86E129830, 16 bytes long.
 Data: <&#224; S-&#246;           > E0 02 53 2D F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001F86E129010, 16 bytes long.
 Data: <  S-&#246;           > 10 04 53 2D F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001F86E1293D0, 16 bytes long.
 Data: <p S-&#246;           > 70 04 53 2D F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001F86E128ED0, 16 bytes long.
 Data: < &#192;Q-&#246;           > 18 C0 51 2D F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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