Task 38599113

Name TYK2_A08_A06_r0_5-QUICO_ATM_GAFF2_NAGL_TYK2-3-5-RND1994_0
Workunit 31554099
Created 8 Apr 2026, 15:05:40 UTC
Sent 8 Apr 2026, 15:05:54 UTC
Report deadline 13 Apr 2026, 15:05:54 UTC
Received 9 Apr 2026, 5:12:46 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 638290
Run time 3 hours 30 min 48 sec
CPU time 3 hours 11 min 35 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 52,232.87 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 698.37 MB
Peak swap size 13.00 GB
Peak disk usage 3.07 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
21:41:17 (46076): wrapper (7.9.26016): starting
21:41:17 (46076): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A08_A06_0.pdb
QB_A08_A06_0.xml
QB_A08_A06.inpcrd
QB_A08_A06_input.yaml
QB_A08_A06.pdb
QB_A08_A06.prmtop
QB_A08_A06_sys.xml
run.bat
run.sh
21:41:18 (46076): Library/usr/bin/tar.exe exited; CPU time 0.015625
21:41:18 (46076): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
01:11:13 (46076): C:/Windows/system32/cmd.exe exited; CPU time 11495.500000
01:11:13 (46076): called boinc_finish(0)
0 bytes in 0 Free Blocks.
536 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 280272307 bytes.
Dumping objects ->
{3835270} normal block at 0x000001B43FC0DCE0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835259} normal block at 0x000001B43DE446F0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835248} normal block at 0x000001B43DE44D80, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835237} normal block at 0x000001B43DE44C30, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835226} normal block at 0x000001B43DE44B50, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835195} normal block at 0x000001B43FC58D00, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835184} normal block at 0x000001B43DEA9FD0, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835181} normal block at 0x000001B43DE3D250, 8 bytes long.
 Data: <  5>&#180;   > 00 00 35 3E B4 01 00 00 
{3834563} normal block at 0x000001B43DEA9BC0, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833957} normal block at 0x000001B43DE3D980, 8 bytes long.
 Data: < 9&#203;?&#180;   > 80 39 CB 3F B4 01 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x000001B43DE312F0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001B43DE32040, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x000001B43DE45FB0, 16 bytes long.
 Data: <xe&#228;=&#180;           > 78 65 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001B43DE45830, 16 bytes long.
 Data: <Pe&#228;=&#180;           > 50 65 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001B43DE413C0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x000001B43DE45470, 16 bytes long.
 Data: <(e&#228;=&#180;           > 28 65 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001B43DE45380, 16 bytes long.
 Data: < e&#228;=&#180;           > 00 65 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001B43DE45330, 16 bytes long.
 Data: <&#216;d&#228;=&#180;           > D8 64 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001B43DE458D0, 16 bytes long.
 Data: <&#176;d&#228;=&#180;           > B0 64 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001B43DE447D0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x000001B43DE45C90, 16 bytes long.
 Data: <  &#227;=&#180;           > 98 16 E3 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001B43DE40A60, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x000001B43DE45790, 16 bytes long.
 Data: <p &#227;=&#180;           > 70 16 E3 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001B43DE45510, 16 bytes long.
 Data: <H &#227;=&#180;           > 48 16 E3 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001B43DE46140, 16 bytes long.
 Data: <  &#227;=&#180;           > 20 16 E3 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001B43DE456A0, 16 bytes long.
 Data: <&#248; &#227;=&#180;           > F8 15 E3 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001B43DE45EC0, 16 bytes long.
 Data: <&#208; &#227;=&#180;           > D0 15 E3 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001B43DE452E0, 16 bytes long.
 Data: <&#168; &#227;=&#180;           > A8 15 E3 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001B43DE41180, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x000001B43DE460A0, 16 bytes long.
 Data: <  &#227;=&#180;           > 80 15 E3 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001B43DE31580, 320 bytes long.
 Data: <&#160;`&#228;=&#180;     &#228;=&#180;   > A0 60 E4 3D B4 01 00 00 80 11 E4 3D B4 01 00 00 
{274} normal block at 0x000001B43DE453D0, 16 bytes long.
 Data: < d&#228;=&#180;           > 90 64 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001B43DE45290, 16 bytes long.
 Data: <hd&#228;=&#180;           > 68 64 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001B43DE41120, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x000001B43DE460F0, 16 bytes long.
 Data: <@d&#228;=&#180;           > 40 64 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001B43DE40820, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x000001B43DE45E70, 16 bytes long.
 Data: < c&#228;=&#180;           > 88 63 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001B43DE45740, 16 bytes long.
 Data: <`c&#228;=&#180;           > 60 63 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001B43DE461E0, 16 bytes long.
 Data: <8c&#228;=&#180;           > 38 63 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001B43DE45C40, 16 bytes long.
 Data: < c&#228;=&#180;           > 10 63 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001B43DE455B0, 16 bytes long.
 Data: <&#232;b&#228;=&#180;           > E8 62 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001B43DE45B00, 16 bytes long.
 Data: <&#192;b&#228;=&#180;           > C0 62 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001B43DE46050, 16 bytes long.
 Data: <`G&#228;=&#180;           > 60 47 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001B43DE44760, 40 bytes long.
 Data: <P`&#228;=&#180;     &#197;?&#180;   > 50 60 E4 3D B4 01 00 00 00 8D C5 3F B4 01 00 00 
{260} normal block at 0x000001B43DE45BF0, 16 bytes long.
 Data: <&#160;b&#228;=&#180;           > A0 62 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001B43DE45650, 16 bytes long.
 Data: <xb&#228;=&#180;           > 78 62 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001B43DE40D60, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x000001B43DE456F0, 16 bytes long.
 Data: <Pb&#228;=&#180;           > 50 62 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001B43DE46250, 992 bytes long.
 Data: <&#240;V&#228;=&#180;   ` &#228;=&#180;   > F0 56 E4 3D B4 01 00 00 60 0D E4 3D B4 01 00 00 
{92} normal block at 0x000001B43DE409A0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x000001B43DE3D110, 16 bytes long.
 Data: <  &#228;=&#180;           > 90 06 E4 3D B4 01 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x000001B43DE40690, 40 bytes long.
 Data: < &#209;&#227;=&#180;   &#160;	&#228;=&#180;   > 10 D1 E3 3D B4 01 00 00 A0 09 E4 3D B4 01 00 00 
{69} normal block at 0x000001B43DE3DA70, 16 bytes long.
 Data: < &#234;B>&#246;           > 80 EA 42 3E F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001B43DE3DAC0, 16 bytes long.
 Data: <@&#233;B>&#246;           > 40 E9 42 3E F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001B43DE3D200, 16 bytes long.
 Data: <&#248;W?>&#246;           > F8 57 3F 3E F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001B43DE3DCA0, 16 bytes long.
 Data: <&#216;W?>&#246;           > D8 57 3F 3E F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001B43DE3D7F0, 16 bytes long.
 Data: <P ?>&#246;           > 50 04 3F 3E F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001B43DE3D930, 16 bytes long.
 Data: <0 ?>&#246;           > 30 04 3F 3E F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001B43DE3D890, 16 bytes long.
 Data: <&#224; ?>&#246;           > E0 02 3F 3E F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001B43DE3DE80, 16 bytes long.
 Data: <  ?>&#246;           > 10 04 3F 3E F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001B43DE3DE30, 16 bytes long.
 Data: <p ?>&#246;           > 70 04 3F 3E F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001B43DE3D480, 16 bytes long.
 Data: < &#192;=>&#246;           > 18 C0 3D 3E F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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