Task 38598615

Name TYK2_A04_A14_r0_1-QUICO_ATM_GAFF2_NAGL_TYK2-2-5-RND1235_1
Workunit 31552407
Created 8 Apr 2026, 10:42:15 UTC
Sent 8 Apr 2026, 10:42:30 UTC
Report deadline 13 Apr 2026, 10:42:30 UTC
Received 8 Apr 2026, 19:49:00 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 565480
Run time 8 hours 33 min 37 sec
CPU time 7 hours 11 min 47 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 19,181.29 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 619.12 MB
Peak swap size 2.38 GB
Peak disk usage 3.38 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:12:12 (5256): wrapper (7.9.26016): starting
05:12:12 (5256): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A04_A14_0.pdb
QB_A04_A14_0.xml
QB_A04_A14.inpcrd
QB_A04_A14_input.yaml
QB_A04_A14.pdb
QB_A04_A14.prmtop
QB_A04_A14_sys.xml
run.bat
run.sh
05:12:17 (5256): Library/usr/bin/tar.exe exited; CPU time 0.000000
05:12:17 (5256): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
13:47:01 (5256): C:/Windows/system32/cmd.exe exited; CPU time 25907.218750
13:47:01 (5256): called boinc_finish(0)
0 bytes in 0 Free Blocks.
726 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 314718793 bytes.
Dumping objects ->
{3835251} normal block at 0x0000021EE6380CA0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835240} normal block at 0x0000021EE63815D0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835229} normal block at 0x0000021EE6381480, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835218} normal block at 0x0000021EE6381410, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835207} normal block at 0x0000021EE63807D0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835176} normal block at 0x0000021EE642ED60, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835165} normal block at 0x0000021EE49FFA80, 235 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835162} normal block at 0x0000021EE4A0B5A0, 8 bytes long.
 Data: <  &#149;&#228;    > 00 00 95 E4 1E 02 00 00 
{3834555} normal block at 0x0000021EE4A00400, 235 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833945} normal block at 0x0000021EE4A0B690, 8 bytes long.
 Data: <&#176; &#160;&#228;    > B0 08 A0 E4 1E 02 00 00 
..\zip\boinc_zip.cpp(122) : {304} normal block at 0x0000021EE4A14500, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000021EE4A15440, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{288} normal block at 0x0000021EE4A160D0, 16 bytes long.
 Data: <&#216;m&#161;&#228;            > D8 6D A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000021EE4A157C0, 16 bytes long.
 Data: <&#176;m&#161;&#228;            > B0 6D A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000021EE4A11560, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{285} normal block at 0x0000021EE4A15770, 16 bytes long.
 Data: < m&#161;&#228;            > 88 6D A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000021EE4A15F90, 16 bytes long.
 Data: <`m&#161;&#228;            > 60 6D A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000021EE4A156D0, 16 bytes long.
 Data: <8m&#161;&#228;            > 38 6D A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000021EE4A15EA0, 16 bytes long.
 Data: < m&#161;&#228;            > 10 6D A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000021EE4A0F9D0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{280} normal block at 0x0000021EE4A15EF0, 16 bytes long.
 Data: <&#216;S&#161;&#228;            > D8 53 A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000021EE4A117A0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{278} normal block at 0x0000021EE4A15630, 16 bytes long.
 Data: <&#176;S&#161;&#228;            > B0 53 A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000021EE4A16260, 16 bytes long.
 Data: < S&#161;&#228;            > 88 53 A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000021EE4A15E00, 16 bytes long.
 Data: <`S&#161;&#228;            > 60 53 A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000021EE4A15CC0, 16 bytes long.
 Data: <8S&#161;&#228;            > 38 53 A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000021EE4A155E0, 16 bytes long.
 Data: < S&#161;&#228;            > 10 53 A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000021EE4A15900, 16 bytes long.
 Data: <&#232;R&#161;&#228;            > E8 52 A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000021EE4A11920, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{270} normal block at 0x0000021EE4A15540, 16 bytes long.
 Data: <&#192;R&#161;&#228;            > C0 52 A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000021EE4A152C0, 320 bytes long.
 Data: <@U&#161;&#228;      &#161;&#228;    > 40 55 A1 E4 1E 02 00 00 20 19 A1 E4 1E 02 00 00 
{268} normal block at 0x0000021EE4A15C70, 16 bytes long.
 Data: <&#240;l&#161;&#228;            > F0 6C A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000021EE4A15E50, 16 bytes long.
 Data: <&#200;l&#161;&#228;            > C8 6C A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000021EE4A10C60, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{265} normal block at 0x0000021EE4A15C20, 16 bytes long.
 Data: <&#160;l&#161;&#228;            > A0 6C A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000021EE4A10A20, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{263} normal block at 0x0000021EE4A15B80, 16 bytes long.
 Data: <&#232;k&#161;&#228;            > E8 6B A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000021EE4A15590, 16 bytes long.
 Data: <&#192;k&#161;&#228;            > C0 6B A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000021EE4A159F0, 16 bytes long.
 Data: < k&#161;&#228;            > 98 6B A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000021EE4A15810, 16 bytes long.
 Data: <pk&#161;&#228;            > 70 6B A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000021EE4A15B30, 16 bytes long.
 Data: <Hk&#161;&#228;            > 48 6B A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000021EE4A16210, 16 bytes long.
 Data: < k&#161;&#228;            > 20 6B A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000021EE4A159A0, 16 bytes long.
 Data: <&#224;&#245;&#160;&#228;            > E0 F5 A0 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000021EE4A0F5E0, 40 bytes long.
 Data: <&#160;Y&#161;&#228;    `&#237;B&#230;    > A0 59 A1 E4 1E 02 00 00 60 ED 42 E6 1E 02 00 00 
{254} normal block at 0x0000021EE4A16170, 16 bytes long.
 Data: < k&#161;&#228;            > 00 6B A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x0000021EE4A16490, 16 bytes long.
 Data: <&#216;j&#161;&#228;            > D8 6A A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x0000021EE4A116E0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{251} normal block at 0x0000021EE4A158B0, 16 bytes long.
 Data: <&#176;j&#161;&#228;            > B0 6A A1 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x0000021EE4A16AB0, 992 bytes long.
 Data: <&#176;X&#161;&#228;    &#224; &#161;&#228;    > B0 58 A1 E4 1E 02 00 00 E0 16 A1 E4 1E 02 00 00 
{86} normal block at 0x0000021EE4A114A0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{85} normal block at 0x0000021EE4A0B550, 16 bytes long.
 Data: <&#176;&#243;&#160;&#228;            > B0 F3 A0 E4 1E 02 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x0000021EE4A0F3B0, 40 bytes long.
 Data: <P&#181;&#160;&#228;    &#160; &#161;&#228;    > 50 B5 A0 E4 1E 02 00 00 A0 14 A1 E4 1E 02 00 00 
{63} normal block at 0x0000021EE4A0B780, 16 bytes long.
 Data: < &#234;"Q&#247;           > 80 EA 22 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000021EE4A0B9B0, 16 bytes long.
 Data: <@&#233;"Q&#247;           > 40 E9 22 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000021EE4A0BB90, 16 bytes long.
 Data: <&#248;W Q&#247;           > F8 57 1F 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000021EE4A0B230, 16 bytes long.
 Data: <&#216;W Q&#247;           > D8 57 1F 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000021EE4A0B820, 16 bytes long.
 Data: <P  Q&#247;           > 50 04 1F 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000021EE4A0AC90, 16 bytes long.
 Data: <0  Q&#247;           > 30 04 1F 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000021EE4A0BAF0, 16 bytes long.
 Data: <&#224;  Q&#247;           > E0 02 1F 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x0000021EE4A0B870, 16 bytes long.
 Data: <   Q&#247;           > 10 04 1F 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x0000021EE4A0B370, 16 bytes long.
 Data: <p  Q&#247;           > 70 04 1F 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x0000021EE4A0B4B0, 16 bytes long.
 Data: < &#192; Q&#247;           > 18 C0 1D 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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